Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm14831-201ENSMUST00000120253 409 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm15842-201ENSMUST00000120513 618 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm7212-201ENSMUST00000120817 348 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm13363-201ENSMUST00000122008 522 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm25180-201ENSMUST00000157746 115 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nedd8P29595 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm28580-201ENSMUST00000186767 88 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm7867-201ENSMUST00000189856 546 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.32□□□□□ -1.56
Nedd8P29595 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm45394-201ENSMUST00000209240 1175 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm18040-201ENSMUST00000217922 827 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nedd8P29595 AC147245.1-201ENSMUST00000223294 677 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nedd8P29595 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nedd8P29595 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm23624-201ENSMUST00000082463 321 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm5446-201ENSMUST00000091762 784 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nedd8P29595 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nedd8P29595 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nedd8P29595 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Nedd8P29595 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Gm45562-201ENSMUST00000210015 1537 ntBASIC5.32□□□□□ -1.56
Nedd8P29595 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nedd8P29595 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Nedd8P29595 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm45793-201ENSMUST00000207900 1342 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Nedd8P29595 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm11699-201ENSMUST00000119016 401 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Nedd8P29595 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.31□□□□□ -1.56
Nedd8P29595 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm29124-201ENSMUST00000186576 452 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.31□□□□□ -1.56
Nedd8P29595 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm37700-201ENSMUST00000192617 965 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.31□□□□□ -1.56
Nedd8P29595 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 Gm8412-201ENSMUST00000077493 440 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Nedd8P29595 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Nedd8P29595 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Nedd8P29595 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nedd8P29595 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Nedd8P29595 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.31□□□□□ -1.56
Nedd8P29595 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nedd8P29595 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nedd8P29595 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nedd8P29595 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nedd8P29595 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nedd8P29595 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nedd8P29595 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms