Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm14912-201ENSMUST00000120166 1773 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm26289-201ENSMUST00000104169 131 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm11256-201ENSMUST00000118109 829 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm13121-201ENSMUST00000120637 632 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Mir1960-201ENSMUST00000157488 78 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm25219-201ENSMUST00000157545 330 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm45156-201ENSMUST00000207255 439 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 AC154368.2-201ENSMUST00000222334 1724 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm22581-201ENSMUST00000083735 136 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Trim3Q9R1R2 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm14886-201ENSMUST00000117208 2629 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm13702-201ENSMUST00000118542 825 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm7658-201ENSMUST00000119064 1124 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm14098-201ENSMUST00000119295 623 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm14485-201ENSMUST00000119489 493 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm11925-201ENSMUST00000121375 535 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm23894-201ENSMUST00000158107 313 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm8183-201ENSMUST00000183134 980 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm27998-201ENSMUST00000184902 361 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm37177-201ENSMUST00000193768 417 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Gm7557-201ENSMUST00000221935 865 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.77□□□□□ -1.49
Trim3Q9R1R2 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms