Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm9499-201ENSMUST00000180888 964 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm44865-201ENSMUST00000207240 531 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm45279-201ENSMUST00000210315 391 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 AC069561.1-201ENSMUST00000213750 424 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.1□□□□□ -1.43
Sf3a3Q9D554 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sf3a3Q9D554 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 AC158982.1-205ENSMUST00000227339 1876 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm22256-201ENSMUST00000102291 107 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm24989-201ENSMUST00000104461 88 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm11926-201ENSMUST00000118520 430 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm25395-201ENSMUST00000157343 272 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm28573-201ENSMUST00000187821 380 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm9114-201ENSMUST00000188558 997 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm28846-201ENSMUST00000189161 368 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm28400-201ENSMUST00000191332 380 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm7412-201ENSMUST00000191692 605 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm37770-201ENSMUST00000192855 772 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 AC164550.1-201ENSMUST00000217821 1066 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sf3a3Q9D554 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC6.09□□□□□ -1.44
Sf3a3Q9D554 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Sf3a3Q9D554 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Sf3a3Q9D554 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sf3a3Q9D554 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.09□□□□□ -1.44
Sf3a3Q9D554 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Sf3a3Q9D554 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Gm14733-201ENSMUST00000117680 133 ntBASIC6.08□□□□□ -1.44
Sf3a3Q9D554 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms