Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm10221-201ENSMUST00000088299 309 ntBASIC6.9□□□□□ -1.3
Smc1aQ9CU62 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.9□□□□□ -1.3
Smc1aQ9CU62 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.9□□□□□ -1.31
Smc1aQ9CU62 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Smc1aQ9CU62 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm44901-201ENSMUST00000208157 3977 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm12099-201ENSMUST00000118660 750 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 M6pr-ps-201ENSMUST00000120481 830 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm22235-201ENSMUST00000157085 110 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm23343-201ENSMUST00000158964 143 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm16557-201ENSMUST00000159182 191 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm17366-201ENSMUST00000167629 187 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm37463-201ENSMUST00000193819 796 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm18467-201ENSMUST00000208805 434 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm9535-201ENSMUST00000218499 768 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm9293-201ENSMUST00000223096 306 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 AV026068-216ENSMUST00000223874 328 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 AC154484.2-201ENSMUST00000228359 818 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Smc1aQ9CU62 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm24434-201ENSMUST00000104081 132 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm7212-201ENSMUST00000120817 348 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm23225-201ENSMUST00000158121 114 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm26169-201ENSMUST00000158420 135 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm27512-201ENSMUST00000175328 126 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm27970-201ENSMUST00000184854 407 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm8502-201ENSMUST00000185708 901 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm21147-201ENSMUST00000186046 913 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm37430-201ENSMUST00000193039 196 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 Gm43392-201ENSMUST00000196560 434 ntBASIC6.88□□□□□ -1.31
Smc1aQ9CU62 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms