Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Use1Q9CQ56 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Use1Q9CQ56 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm8312-201ENSMUST00000119380 618 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm11617-201ENSMUST00000119609 639 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm6434-201ENSMUST00000163316 372 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm6541-201ENSMUST00000165542 561 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm8009-201ENSMUST00000191672 436 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm19324-201ENSMUST00000213229 1169 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm18103-201ENSMUST00000216621 779 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 AC122459.3-201ENSMUST00000228508 1042 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.71□□□□□ -1.5
Use1Q9CQ56 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm26340-201ENSMUST00000102365 99 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm11107-201ENSMUST00000165414 505 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Mir5107-201ENSMUST00000175586 88 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Mir7011-201ENSMUST00000183768 73 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm27185-201ENSMUST00000184296 247 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm8367-201ENSMUST00000186145 887 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm5886-202ENSMUST00000203957 522 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 AC079644.2-201ENSMUST00000220581 322 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.7□□□□□ -1.5
Use1Q9CQ56 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Use1Q9CQ56 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms