Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm24888-201ENSMUST00000104387 130 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm11799-201ENSMUST00000116110 460 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm15225-201ENSMUST00000120449 1017 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm17063-201ENSMUST00000168135 456 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm18006-201ENSMUST00000177411 662 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm20778-201ENSMUST00000178524 627 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm26557-201ENSMUST00000180756 493 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm7554-201ENSMUST00000202282 574 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm18600-201ENSMUST00000207205 505 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm20074-201ENSMUST00000208144 484 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 AC153899.1-201ENSMUST00000214092 1117 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm21731-201ENSMUST00000079524 489 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.5□□□□□ -1.37
CopaQ8CIE6 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CopaQ8CIE6 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm37470-201ENSMUST00000193378 2798 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm26422-201ENSMUST00000104276 132 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm13265-201ENSMUST00000118090 421 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm15765-201ENSMUST00000118407 910 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm4910-201ENSMUST00000119605 366 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm15502-201ENSMUST00000121449 208 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm12152-201ENSMUST00000122465 684 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm23430-201ENSMUST00000122490 314 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm5125-201ENSMUST00000148614 624 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm10177-201ENSMUST00000160052 444 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm10410-201ENSMUST00000180138 384 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm26898-201ENSMUST00000181678 384 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm27998-201ENSMUST00000184902 361 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm29650-201ENSMUST00000188485 742 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm6366-201ENSMUST00000198766 826 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm43531-201ENSMUST00000200676 1114 ntBASIC6.49□□□□□ -1.37
CopaQ8CIE6 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms