Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm22581-201ENSMUST00000083735 136 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm13590-201ENSMUST00000120183 1588 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm14382-201ENSMUST00000117374 437 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm12467-201ENSMUST00000117625 745 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm13811-201ENSMUST00000117800 256 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm26046-201ENSMUST00000157312 166 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm22690-201ENSMUST00000175054 110 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm8009-201ENSMUST00000191672 436 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm45525-201ENSMUST00000210800 389 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 AC165292.1-201ENSMUST00000215218 620 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 AC167202.1-201ENSMUST00000219027 331 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm3785-201ENSMUST00000221000 202 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 AC091783.2-201ENSMUST00000224626 740 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 AC174797.4-201ENSMUST00000225510 347 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Gm20541-201ENSMUST00000173035 1406 ntBASIC7.4□□□□□ -1.22
Brf1Q8CFK2 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Brf1Q8CFK2 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Brf1Q8CFK2 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
Brf1Q8CFK2 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
Brf1Q8CFK2 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.4□□□□□ -1.23
Brf1Q8CFK2 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
Brf1Q8CFK2 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Brf1Q8CFK2 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Brf1Q8CFK2 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Brf1Q8CFK2 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm42772-201ENSMUST00000199945 3041 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm44102-201ENSMUST00000204031 1666 ntBASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
Brf1Q8CFK2 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms