Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm22952-201ENSMUST00000116720 120 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm11227-201ENSMUST00000119774 471 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm12396-201ENSMUST00000121600 306 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm2986-201ENSMUST00000121603 382 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm26162-201ENSMUST00000157793 132 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm11107-201ENSMUST00000165414 505 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm27617-201ENSMUST00000184321 168 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm29124-201ENSMUST00000186576 452 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm29496-201ENSMUST00000189854 693 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm37784-201ENSMUST00000193233 189 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm44316-201ENSMUST00000199274 97 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm45082-201ENSMUST00000206082 601 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm45448-201ENSMUST00000211739 209 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm10095-201ENSMUST00000222765 483 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm9267-201ENSMUST00000222831 404 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 AC173482.3-201ENSMUST00000225492 1212 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Ccdc28aQ8CEI3 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
Ccdc28aQ8CEI3 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Ccdc28aQ8CEI3 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Ccdc28aQ8CEI3 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.21□□□□□ -1.41
Ccdc28aQ8CEI3 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm25346-201ENSMUST00000104509 128 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm22311-201ENSMUST00000158006 110 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm25904-201ENSMUST00000158491 143 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm2367-201ENSMUST00000192374 472 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm37341-201ENSMUST00000194680 371 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm18427-201ENSMUST00000195422 515 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm31211-201ENSMUST00000199170 253 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gm18226-201ENSMUST00000215261 521 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 AC122459.2-201ENSMUST00000227099 638 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.21□□□□□ -1.42
Ccdc28aQ8CEI3 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms