Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Mir449c-201ENSMUST00000102192 109 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm13114-201ENSMUST00000117605 106 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm7931-201ENSMUST00000121537 271 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm22223-201ENSMUST00000157360 125 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Mir1945-201ENSMUST00000157919 78 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm9671-201ENSMUST00000171502 547 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm4845-201ENSMUST00000179202 562 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm26923-201ENSMUST00000182615 996 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm37189-201ENSMUST00000192131 298 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm37196-201ENSMUST00000194762 906 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm43222-201ENSMUST00000199013 603 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm9685-201ENSMUST00000211275 538 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm24029-201ENSMUST00000083928 143 ntBASIC6.15□□□□□ -1.42
Trub1Q8C0D0 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Trub1Q8C0D0 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC6.15□□□□□ -1.43
Trub1Q8C0D0 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm12307-201ENSMUST00000120581 590 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm8317-201ENSMUST00000121261 471 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm13531-201ENSMUST00000121893 543 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm15840-201ENSMUST00000122099 943 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm15237-201ENSMUST00000122104 469 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm21542-201ENSMUST00000182307 993 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm28066-201ENSMUST00000188657 472 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm18427-201ENSMUST00000195422 515 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm29736-201ENSMUST00000198189 385 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm2602-201ENSMUST00000202112 571 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm44108-201ENSMUST00000203525 422 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm18940-201ENSMUST00000222518 871 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms