Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm28379-202ENSMUST00000187676 2896 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm37216-201ENSMUST00000193817 3478 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Usp40Q8BWR4 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Usp40Q8BWR4 Gm34294-201ENSMUST00000191912 4263 ntBASIC8.52□□□□□ -1.04
Usp40Q8BWR4 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.52□□□□□ -1.04
Usp40Q8BWR4 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm28322-201ENSMUST00000185627 1475 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm43981-201ENSMUST00000203285 1467 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm14510-201ENSMUST00000116165 1092 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm13811-201ENSMUST00000117800 256 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm25459-201ENSMUST00000157953 114 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm23662-201ENSMUST00000158046 111 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm25433-201ENSMUST00000158283 286 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm22932-201ENSMUST00000175510 72 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm24957-201ENSMUST00000179604 132 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm5990-201ENSMUST00000203126 746 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm44837-201ENSMUST00000206863 717 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm43285-201ENSMUST00000196563 3592 ntBASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Usp40Q8BWR4 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm42881-201ENSMUST00000198636 3344 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm13193-201ENSMUST00000117275 225 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm15078-201ENSMUST00000118371 782 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm20401-201ENSMUST00000173717 212 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm29551-201ENSMUST00000190913 698 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm4742-201ENSMUST00000200261 771 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm19169-201ENSMUST00000220109 1246 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm18628-201ENSMUST00000220584 475 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 AC127242.4-201ENSMUST00000221242 470 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 AC211878.1-201ENSMUST00000221668 474 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Vmn1r89-206ENSMUST00000227319 985 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm26437-201ENSMUST00000082595 105 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm12586-201ENSMUST00000117328 1316 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm19093-201ENSMUST00000210671 1454 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Gm38322-201ENSMUST00000194074 2300 ntBASIC8.51□□□□□ -1.05
Usp40Q8BWR4 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Usp40Q8BWR4 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms