Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Scaf4Q6PFF0 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Scaf4Q6PFF0 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scaf4Q6PFF0 Scn9a-203ENSMUST00000112354 6471 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
Scaf4Q6PFF0 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scaf4Q6PFF0 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Scaf4Q6PFF0 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm6982-201ENSMUST00000118752 1560 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm18491-201ENSMUST00000192492 1594 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 AC131667.1-201ENSMUST00000214665 2175 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm14624-201ENSMUST00000117746 192 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm13798-201ENSMUST00000118285 139 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm16053-201ENSMUST00000120511 188 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm11383-201ENSMUST00000121346 807 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm11688-201ENSMUST00000122145 308 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm20430-201ENSMUST00000172474 207 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm20549-201ENSMUST00000174804 429 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm30517-201ENSMUST00000197350 772 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm43013-201ENSMUST00000198216 247 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm31579-201ENSMUST00000203306 966 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm44727-201ENSMUST00000204225 451 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm2221-201ENSMUST00000209342 418 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm4247-201ENSMUST00000211441 1042 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 AC156832.3-201ENSMUST00000215591 435 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm7240-201ENSMUST00000220769 664 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm10126-201ENSMUST00000221732 168 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm18618-201ENSMUST00000222211 473 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 AC154834.1-201ENSMUST00000224697 358 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm24046-201ENSMUST00000083111 165 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Scaf4Q6PFF0 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Scaf4Q6PFF0 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms