Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm22728-201ENSMUST00000158087 129 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm17919-201ENSMUST00000173344 312 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm16531-201ENSMUST00000180658 967 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm1972-201ENSMUST00000181606 964 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm43224-201ENSMUST00000201567 898 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm44566-201ENSMUST00000207638 304 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 AC132384.5-201ENSMUST00000218562 226 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 AC124601.1-201ENSMUST00000220531 135 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 AC153153.2-201ENSMUST00000223572 411 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 AC125405.2-201ENSMUST00000227862 383 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 n-R5s169-201ENSMUST00000083110 120 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm33167-201ENSMUST00000201933 2643 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Gm26416-201ENSMUST00000104280 134 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Mir669i-201ENSMUST00000117007 127 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 AC123917.1-201ENSMUST00000228063 1048 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Gm6195-201ENSMUST00000063059 357 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Gm23734-201ENSMUST00000083753 109 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 AC154347.1-201ENSMUST00000221358 3105 ntBASIC12.61□□□□□ -0.39
Trim41Q5NCC3 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim41Q5NCC3 AC154461.6-201ENSMUST00000224815 2630 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm14197-201ENSMUST00000117480 1049 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm9439-201ENSMUST00000119554 973 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm17194-201ENSMUST00000164610 348 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm37715-201ENSMUST00000193206 235 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm43384-201ENSMUST00000200569 637 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm8125-201ENSMUST00000216602 738 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 CT025602.1-201ENSMUST00000227281 382 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm43533-201ENSMUST00000202933 2936 ntBASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim41Q5NCC3 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms