Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm22701-201ENSMUST00000175371 291 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm37265-201ENSMUST00000191698 885 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm43467-201ENSMUST00000197441 437 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm45485-201ENSMUST00000211229 357 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Trafd1Q3UDK1 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
Trafd1Q3UDK1 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Trafd1Q3UDK1 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.02□□□□□ -1.44
Trafd1Q3UDK1 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm26146-201ENSMUST00000104478 185 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm12244-201ENSMUST00000119500 291 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm14294-201ENSMUST00000119749 751 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm14331-201ENSMUST00000120396 409 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm12833-201ENSMUST00000136112 477 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm26162-201ENSMUST00000157793 132 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Mir1945-201ENSMUST00000157919 78 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm37135-201ENSMUST00000192652 534 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm42776-201ENSMUST00000198031 406 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm45008-201ENSMUST00000206420 493 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.02□□□□□ -1.45
Trafd1Q3UDK1 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trafd1Q3UDK1 Gm14925-201ENSMUST00000120611 438 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms