Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Usp39Q3TIX9 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Usp39Q3TIX9 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Usp39Q3TIX9 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm22256-201ENSMUST00000102291 107 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Mir674-201ENSMUST00000102421 100 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm11393-201ENSMUST00000118019 288 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm11987-201ENSMUST00000118524 381 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm15227-201ENSMUST00000121844 399 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm13669-201ENSMUST00000122366 457 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm20454-201ENSMUST00000172713 221 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm20432-201ENSMUST00000173716 250 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm9274-201ENSMUST00000182505 984 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Mir6348-201ENSMUST00000183804 120 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm37620-201ENSMUST00000192910 501 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm5711-201ENSMUST00000197896 421 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm18040-201ENSMUST00000217922 827 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm22684-201ENSMUST00000082849 132 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.29□□□□□ -1.4
Usp39Q3TIX9 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm14116-201ENSMUST00000117733 805 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm14854-201ENSMUST00000117758 841 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm11501-201ENSMUST00000118039 581 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm15149-201ENSMUST00000119370 360 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm15311-201ENSMUST00000119682 282 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm15305-201ENSMUST00000120354 288 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm11389-201ENSMUST00000121407 430 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm11787-201ENSMUST00000121996 1050 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm16363-201ENSMUST00000132460 877 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm11545-201ENSMUST00000146507 375 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms