Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm13940-201ENSMUST00000121023 301 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm15038-201ENSMUST00000122144 296 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm24065-201ENSMUST00000157487 264 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm26410-201ENSMUST00000157670 261 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm25387-201ENSMUST00000157813 132 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm22186-201ENSMUST00000157822 122 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm26211-201ENSMUST00000158578 129 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm24824-201ENSMUST00000175097 78 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm27849-201ENSMUST00000183673 125 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm28489-201ENSMUST00000186655 316 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm38237-201ENSMUST00000193366 376 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm38360-201ENSMUST00000195130 454 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm43198-201ENSMUST00000200927 326 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Vmn1r41-202ENSMUST00000226337 888 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm6776-201ENSMUST00000057752 900 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm20302-201ENSMUST00000080671 275 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm38263-201ENSMUST00000195879 3059 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm10743-201ENSMUST00000219611 2358 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm44898-201ENSMUST00000205934 2223 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Col8a1Q00780 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Gm37595-201ENSMUST00000192668 1742 ntBASIC5.94□□□□□ -1.46
Col8a1Q00780 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col8a1Q00780 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Cmah-208ENSMUST00000224819 9482 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm6982-201ENSMUST00000118752 1560 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Klf5-202ENSMUST00000226784 2852 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm42630-201ENSMUST00000195908 3448 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col8a1Q00780 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm15779-201ENSMUST00000117470 412 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm14865-201ENSMUST00000117523 494 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm13835-201ENSMUST00000118459 685 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm4914-201ENSMUST00000119757 459 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm13720-201ENSMUST00000120741 196 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm2986-201ENSMUST00000121603 382 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm14411-201ENSMUST00000121798 914 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm13131-201ENSMUST00000122228 321 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col8a1Q00780 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col8a1Q00780 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm21241-201ENSMUST00000179551 934 ntBASIC5.93□□□□□ -1.46
Col8a1Q00780 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms