Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SgcbP82349 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.51□□□□□ -1.37
SgcbP82349 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SgcbP82349 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SgcbP82349 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm16436-201ENSMUST00000121510 1607 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Klf10-202ENSMUST00000226363 2917 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm37499-201ENSMUST00000194683 3478 ntBASIC6.5□□□□□ -1.37
SgcbP82349 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm25546-201ENSMUST00000103977 132 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm16394-201ENSMUST00000117289 675 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm13352-201ENSMUST00000117515 262 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm13414-201ENSMUST00000117516 727 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm13463-201ENSMUST00000119020 233 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm5135-201ENSMUST00000121100 573 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm15644-201ENSMUST00000121764 387 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm22025-201ENSMUST00000122734 302 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm2892-201ENSMUST00000145537 711 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm22755-201ENSMUST00000157143 100 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm24438-201ENSMUST00000157893 115 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm16580-201ENSMUST00000162696 1044 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm26959-201ENSMUST00000182376 978 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm28416-201ENSMUST00000188334 292 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm35108-201ENSMUST00000194321 699 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm33191-201ENSMUST00000195604 699 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SgcbP82349 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm44403-201ENSMUST00000198554 129 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm43224-201ENSMUST00000201567 898 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm42850-201ENSMUST00000202094 201 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm4605-201ENSMUST00000203148 625 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm7943-201ENSMUST00000212078 1034 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm18774-201ENSMUST00000218269 601 ntBASIC6.5□□□□□ -1.37
SgcbP82349 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm18704-201ENSMUST00000219736 446 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SgcbP82349 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SgcbP82349 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm23975-201ENSMUST00000082685 106 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Gm22504-201ENSMUST00000082963 139 ntBASIC6.5□□□□□ -1.37
SgcbP82349 n-R5s60-201ENSMUST00000083299 119 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.5□□□□□ -1.37
SgcbP82349 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SgcbP82349 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm2065-201ENSMUST00000194697 2757 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
SgcbP82349 Gm17791-201ENSMUST00000185660 1501 ntBASIC6.5□□□□□ -1.37
SgcbP82349 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
SgcbP82349 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
SgcbP82349 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.5□□□□□ -1.37
SgcbP82349 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SgcbP82349 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.49□□□□□ -1.37
SgcbP82349 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SgcbP82349 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms