Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm26416-201ENSMUST00000104280 134 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm12123-201ENSMUST00000120348 472 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm6977-201ENSMUST00000121568 512 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm13237-201ENSMUST00000122151 635 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm8577-201ENSMUST00000122420 986 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC8.04□□□□□ -1.12
Rfx1P48377 Gm22143-201ENSMUST00000157401 203 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC8.04□□□□□ -1.12
Rfx1P48377 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.04□□□□□ -1.12
Rfx1P48377 Mir1231-201ENSMUST00000175639 81 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Mir8120-201ENSMUST00000185035 139 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC8.04□□□□□ -1.12
Rfx1P48377 Gm6197-201ENSMUST00000192273 454 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm18635-201ENSMUST00000199020 1060 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm44281-201ENSMUST00000203090 166 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm44212-201ENSMUST00000205016 897 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Gm18205-201ENSMUST00000209215 841 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm45474-201ENSMUST00000209471 408 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm4247-201ENSMUST00000211441 1042 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC8.04□□□□□ -1.12
Rfx1P48377 Gm19181-201ENSMUST00000218891 940 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Gm46424-201ENSMUST00000221567 168 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 AC154727.1-201ENSMUST00000226537 499 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 AC157572.4-201ENSMUST00000228203 549 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Cma2-202ENSMUST00000228263 857 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rfx1P48377 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC8.04□□□□□ -1.12
Rfx1P48377 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rfx1P48377 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Rfx1P48377 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC8.04□□□□□ -1.12
Rfx1P48377 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Rfx1P48377 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm42989-201ENSMUST00000200646 2306 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm45457-201ENSMUST00000209931 3089 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm13712-201ENSMUST00000117484 2295 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Rfx1P48377 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm23484-201ENSMUST00000104178 131 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm14898-201ENSMUST00000120202 645 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm15877-201ENSMUST00000121897 964 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm15077-201ENSMUST00000122344 362 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm13194-201ENSMUST00000142299 311 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm16236-201ENSMUST00000159588 379 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm29460-201ENSMUST00000188607 714 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm38061-201ENSMUST00000192490 365 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm37088-201ENSMUST00000193887 406 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm43489-201ENSMUST00000196810 993 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm34149-201ENSMUST00000203547 304 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Rfx1P48377 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 AC164436.1-201ENSMUST00000227074 772 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 AC131029.2-203ENSMUST00000228116 1244 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm6887-201ENSMUST00000080945 482 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm24707-201ENSMUST00000082812 107 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm25582-201ENSMUST00000083412 110 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm45250-201ENSMUST00000209414 3592 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Rfx1P48377 Gm37356-201ENSMUST00000193362 1613 ntBASIC8.03□□□□□ -1.12
Rfx1P48377 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms