Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm29489-201ENSMUST00000188934 324 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm42461-201ENSMUST00000198627 1150 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm44163-201ENSMUST00000205140 475 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm10095-201ENSMUST00000222765 483 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm23624-201ENSMUST00000082463 321 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm26442-201ENSMUST00000082588 153 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.72□□□□□ -1.49
Tnfsf4P43488 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Tnfsf4P43488 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Tnfsf4P43488 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC5.71□□□□□ -1.49
Tnfsf4P43488 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Tnfsf4P43488 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Tnfsf4P43488 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Tnfsf4P43488 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Tnfsf4P43488 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm13770-201ENSMUST00000117149 305 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm6744-201ENSMUST00000119303 543 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm31211-201ENSMUST00000199170 253 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm44279-201ENSMUST00000205154 472 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm24029-201ENSMUST00000083928 143 ntBASIC5.71□□□□□ -1.5
Tnfsf4P43488 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Tnfsf4P43488 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.71□□□□□ -1.5
Tnfsf4P43488 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm11256-201ENSMUST00000118109 829 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm13183-201ENSMUST00000118615 789 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm15801-201ENSMUST00000120920 522 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm8783-201ENSMUST00000159764 522 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm17511-201ENSMUST00000172206 342 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm23631-201ENSMUST00000175291 123 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm27004-201ENSMUST00000183300 727 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm29464-201ENSMUST00000187692 513 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm4856-201ENSMUST00000192696 1091 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm37270-201ENSMUST00000194277 330 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm37196-201ENSMUST00000194762 906 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm18427-201ENSMUST00000195422 515 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm43779-201ENSMUST00000196691 829 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm8930-201ENSMUST00000201693 768 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms