Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.16□□□□□ -1.42
HttP42859 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Gm28103-201ENSMUST00000188392 416 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.16□□□□□ -1.42
HttP42859 Gm28137-201ENSMUST00000191478 416 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Gm37882-201ENSMUST00000195254 196 ntBASIC6.16□□□□□ -1.42
HttP42859 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.16□□□□□ -1.42
HttP42859 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.16□□□□□ -1.42
HttP42859 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC6.16□□□□□ -1.42
HttP42859 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Gm43336-201ENSMUST00000200487 4504 ntBASIC6.16□□□□□ -1.42
HttP42859 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC6.15□□□□□ -1.42
HttP42859 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HttP42859 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HttP42859 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Gm13213-201ENSMUST00000119668 474 ntBASIC6.15□□□□□ -1.42
HttP42859 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.15□□□□□ -1.42
HttP42859 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.15□□□□□ -1.42
HttP42859 Gm25430-201ENSMUST00000157614 289 ntBASIC6.15□□□□□ -1.42
HttP42859 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC6.15□□□□□ -1.42
HttP42859 Gm18407-201ENSMUST00000192126 790 ntBASIC6.15□□□□□ -1.42
HttP42859 Gm44053-201ENSMUST00000203364 929 ntBASIC6.15□□□□□ -1.42
HttP42859 Gm45405-201ENSMUST00000211544 609 ntBASIC6.15□□□□□ -1.42
HttP42859 Gm22220-201ENSMUST00000082671 149 ntBASIC6.15□□□□□ -1.42
HttP42859 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.15□□□□□ -1.42
HttP42859 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
HttP42859 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
HttP42859 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
HttP42859 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HttP42859 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
HttP42859 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HttP42859 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
HttP42859 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HttP42859 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC6.15□□□□□ -1.43
HttP42859 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HttP42859 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC6.15□□□□□ -1.43
HttP42859 Gm29111-201ENSMUST00000188823 696 ntBASIC6.15□□□□□ -1.43
HttP42859 Gm28584-201ENSMUST00000191489 696 ntBASIC6.15□□□□□ -1.43
HttP42859 Gm38138-201ENSMUST00000193274 696 ntBASIC6.15□□□□□ -1.43
HttP42859 Gm37991-201ENSMUST00000194297 696 ntBASIC6.15□□□□□ -1.43
HttP42859 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
HttP42859 Gm46327-201ENSMUST00000218240 365 ntBASIC6.15□□□□□ -1.43
HttP42859 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
HttP42859 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.15□□□□□ -1.43
HttP42859 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.15□□□□□ -1.43
HttP42859 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
HttP42859 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
HttP42859 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HttP42859 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
HttP42859 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HttP42859 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
HttP42859 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Gm15152-201ENSMUST00000121540 394 ntBASIC6.14□□□□□ -1.43
HttP42859 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.14□□□□□ -1.43
HttP42859 Clec2j-202ENSMUST00000203658 606 ntBASIC6.14□□□□□ -1.43
HttP42859 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Olfr804-202ENSMUST00000213331 5737 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HttP42859 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.14□□□□□ -1.43
HttP42859 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.14□□□□□ -1.43
HttP42859 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.14□□□□□ -1.43
HttP42859 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HttP42859 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Gm13567-201ENSMUST00000118026 247 ntBASIC6.14□□□□□ -1.43
HttP42859 Gm24534-201ENSMUST00000157949 291 ntBASIC6.14□□□□□ -1.43
HttP42859 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.14□□□□□ -1.43
HttP42859 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC6.14□□□□□ -1.43
HttP42859 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.14□□□□□ -1.43
HttP42859 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.14□□□□□ -1.43
HttP42859 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HttP42859 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC6.14□□□□□ -1.43
HttP42859 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.14□□□□□ -1.43
HttP42859 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 AC132852.1-201ENSMUST00000214683 2324 ntBASIC6.14□□□□□ -1.43
HttP42859 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
HttP42859 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HttP42859 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC6.14□□□□□ -1.43
HttP42859 Gm22916-201ENSMUST00000157616 119 ntBASIC6.14□□□□□ -1.43
HttP42859 Gm27387-201ENSMUST00000184583 116 ntBASIC6.14□□□□□ -1.43
HttP42859 Gm29124-201ENSMUST00000186576 452 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms