Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Traf1P39428 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Traf1P39428 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Traf1P39428 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Traf1P39428 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.19□□□□□ -1.26
Traf1P39428 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 Gm13818-201ENSMUST00000119441 511 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Gm16269-201ENSMUST00000160532 409 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC7.19□□□□□ -1.26
Traf1P39428 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Gm8895-201ENSMUST00000172300 1223 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Mir6911-201ENSMUST00000184241 69 ntBASIC7.19□□□□□ -1.26
Traf1P39428 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 Gm43105-201ENSMUST00000202987 459 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 AC122459.2-201ENSMUST00000227099 638 ntBASIC7.19□□□□□ -1.26
Traf1P39428 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Traf1P39428 Gm26063-201ENSMUST00000083378 107 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC7.19□□□□□ -1.26
Traf1P39428 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC7.19□□□□□ -1.26
Traf1P39428 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Traf1P39428 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Traf1P39428 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC7.18□□□□□ -1.26
Traf1P39428 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Traf1P39428 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Traf1P39428 Gm23440-201ENSMUST00000104299 130 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm14356-201ENSMUST00000118322 869 ntBASIC7.18□□□□□ -1.26
Traf1P39428 n-R5s19-201ENSMUST00000122793 120 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC7.18□□□□□ -1.26
Traf1P39428 Gm25342-201ENSMUST00000157459 122 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm26486-201ENSMUST00000158021 110 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Olfr331-202ENSMUST00000170501 957 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Traf1P39428 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm27460-201ENSMUST00000184213 100 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm8241-201ENSMUST00000189286 816 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm37477-201ENSMUST00000195215 884 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Gm44225-201ENSMUST00000203582 186 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm2926-201ENSMUST00000205625 239 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC7.18□□□□□ -1.26
Traf1P39428 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC7.18□□□□□ -1.26
Traf1P39428 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC7.18□□□□□ -1.26
Traf1P39428 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.18□□□□□ -1.26
Traf1P39428 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Traf1P39428 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Traf1P39428 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Traf1P39428 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 AC154630.1-201ENSMUST00000215334 2440 ntBASIC7.18□□□□□ -1.26
Traf1P39428 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Traf1P39428 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Traf1P39428 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Traf1P39428 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC7.17□□□□□ -1.26
Traf1P39428 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms