Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm26289-201ENSMUST00000104169 131 ntBASIC5.4□□□□□ -1.54
P20040 Gm25346-201ENSMUST00000104509 128 ntBASIC5.4□□□□□ -1.54
P20040 Gm15016-201ENSMUST00000117300 720 ntBASIC5.4□□□□□ -1.54
P20040 Gm11256-201ENSMUST00000118109 829 ntBASIC5.4□□□□□ -1.54
P20040 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.4□□□□□ -1.54
P20040 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.4□□□□□ -1.54
P20040 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.4□□□□□ -1.54
P20040 Gm23894-201ENSMUST00000158107 313 ntBASIC5.4□□□□□ -1.54
P20040 Gm17046-201ENSMUST00000168078 850 ntBASIC5.4□□□□□ -1.54
P20040 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
P20040 Gm29464-201ENSMUST00000187692 513 ntBASIC5.4□□□□□ -1.54
P20040 Gm28586-201ENSMUST00000189857 456 ntBASIC5.4□□□□□ -1.54
P20040 Gm38217-201ENSMUST00000194358 910 ntBASIC5.4□□□□□ -1.54
P20040 Gm5694-201ENSMUST00000195648 641 ntBASIC5.4□□□□□ -1.54
P20040 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.4□□□□□ -1.54
P20040 Gm43762-201ENSMUST00000201521 295 ntBASIC5.4□□□□□ -1.54
P20040 Gm44253-201ENSMUST00000203387 628 ntBASIC5.4□□□□□ -1.54
P20040 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC5.4□□□□□ -1.54
P20040 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC5.4□□□□□ -1.54
P20040 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.4□□□□□ -1.54
P20040 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.4□□□□□ -1.54
P20040 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.4□□□□□ -1.54
P20040 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.4□□□□□ -1.54
P20040 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.4□□□□□ -1.54
P20040 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
P20040 Gm10540-201ENSMUST00000097581 276 ntBASIC5.4□□□□□ -1.54
P20040 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
P20040 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
P20040 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
P20040 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
P20040 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.4□□□□□ -1.55
P20040 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.4□□□□□ -1.55
P20040 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.4□□□□□ -1.55
P20040 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
P20040 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
P20040 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
P20040 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.39□□□□□ -1.55
P20040 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
P20040 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
P20040 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
P20040 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
P20040 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.39□□□□□ -1.55
P20040 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.39□□□□□ -1.55
P20040 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.39□□□□□ -1.55
P20040 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.39□□□□□ -1.55
P20040 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
P20040 Gm14375-201ENSMUST00000119490 855 ntBASIC5.39□□□□□ -1.55
P20040 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.39□□□□□ -1.55
P20040 Gm26162-201ENSMUST00000157793 132 ntBASIC5.39□□□□□ -1.55
P20040 Gm20530-201ENSMUST00000174261 254 ntBASIC5.39□□□□□ -1.55
P20040 Gm18006-201ENSMUST00000177411 662 ntBASIC5.39□□□□□ -1.55
P20040 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.39□□□□□ -1.55
P20040 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.39□□□□□ -1.55
P20040 Gm28918-201ENSMUST00000188822 699 ntBASIC5.39□□□□□ -1.55
P20040 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Gm37376-201ENSMUST00000192176 453 ntBASIC5.39□□□□□ -1.55
P20040 Gm37135-201ENSMUST00000192652 534 ntBASIC5.39□□□□□ -1.55
P20040 Gm37770-201ENSMUST00000192855 772 ntBASIC5.39□□□□□ -1.55
P20040 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.39□□□□□ -1.55
P20040 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.39□□□□□ -1.55
P20040 Gm6009-201ENSMUST00000210848 280 ntBASIC5.39□□□□□ -1.55
P20040 Gm5055-201ENSMUST00000215697 581 ntBASIC5.39□□□□□ -1.55
P20040 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.39□□□□□ -1.55
P20040 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.39□□□□□ -1.55
P20040 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
P20040 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Gm6990-201ENSMUST00000086830 348 ntBASIC5.39□□□□□ -1.55
P20040 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
P20040 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
P20040 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.38□□□□□ -1.55
P20040 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.38□□□□□ -1.55
P20040 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.38□□□□□ -1.55
P20040 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
P20040 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
P20040 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.38□□□□□ -1.55
P20040 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms