Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.14□□□□□ -1.43
Lire1P11260 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.14□□□□□ -1.43
Lire1P11260 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lire1P11260 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Lire1P11260 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lire1P11260 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Lire1P11260 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lire1P11260 Gm37762-201ENSMUST00000194515 3561 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Mir680-3-201ENSMUST00000102298 87 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Snord88a-201ENSMUST00000116723 90 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Gm14865-201ENSMUST00000117523 494 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Gm5387-201ENSMUST00000119776 857 ntBASIC6.13□□□□□ -1.43
Lire1P11260 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm24228-201ENSMUST00000158829 129 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lire1P11260 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC6.13□□□□□ -1.43
Lire1P11260 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Lire1P11260 Gm26570-201ENSMUST00000180672 342 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Mir6911-201ENSMUST00000184241 69 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.13□□□□□ -1.43
Lire1P11260 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.13□□□□□ -1.43
Lire1P11260 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC6.13□□□□□ -1.43
Lire1P11260 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm42580-201ENSMUST00000197223 753 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.13□□□□□ -1.43
Lire1P11260 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Lire1P11260 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.13□□□□□ -1.43
Lire1P11260 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm18996-201ENSMUST00000214851 755 ntBASIC6.13□□□□□ -1.43
Lire1P11260 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.13□□□□□ -1.43
Lire1P11260 Gm9231-201ENSMUST00000220817 1009 ntBASIC6.13□□□□□ -1.43
Lire1P11260 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.13□□□□□ -1.43
Lire1P11260 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.13□□□□□ -1.43
Lire1P11260 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm43826-201ENSMUST00000199604 2612 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.13□□□□□ -1.43
Lire1P11260 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.13□□□□□ -1.43
Lire1P11260 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.13□□□□□ -1.43
Lire1P11260 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lire1P11260 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.13□□□□□ -1.43
Lire1P11260 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lire1P11260 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.13□□□□□ -1.43
Lire1P11260 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lire1P11260 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lire1P11260 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Lire1P11260 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lire1P11260 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lire1P11260 Gm12468-201ENSMUST00000116189 404 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Lire1P11260 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Lire1P11260 Gm15618-201ENSMUST00000121610 452 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm15242-201ENSMUST00000122459 283 ntBASIC6.12□□□□□ -1.43
Lire1P11260 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lire1P11260 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lire1P11260 Gm25395-201ENSMUST00000157343 272 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm24781-201ENSMUST00000157636 117 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Mir1953-201ENSMUST00000157866 89 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.12□□□□□ -1.43
Lire1P11260 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm9672-201ENSMUST00000166437 425 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Mir6374-201ENSMUST00000184003 107 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm28958-201ENSMUST00000185864 703 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lire1P11260 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.12□□□□□ -1.43
Lire1P11260 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lire1P11260 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lire1P11260 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.12□□□□□ -1.43
Lire1P11260 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm19087-201ENSMUST00000191430 946 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm36935-201ENSMUST00000192526 292 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm36998-201ENSMUST00000193205 704 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm37716-201ENSMUST00000193553 947 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.12□□□□□ -1.43
Lire1P11260 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.12□□□□□ -1.43
Lire1P11260 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.12□□□□□ -1.43
Lire1P11260 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms