Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Chmp6P0C0A3 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.59□□□□□ -1.36
Chmp6P0C0A3 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Chmp6P0C0A3 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm13114-201ENSMUST00000117605 106 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm26346-201ENSMUST00000157525 329 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm17048-201ENSMUST00000179266 847 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm26923-201ENSMUST00000182615 996 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm3351-201ENSMUST00000193454 505 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm43744-201ENSMUST00000196387 688 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm4083-201ENSMUST00000207158 451 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm22300-201ENSMUST00000082661 126 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm45179-201ENSMUST00000208452 4337 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.58□□□□□ -1.36
Chmp6P0C0A3 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 AC115760.1-201ENSMUST00000225160 1327 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm15048-201ENSMUST00000118201 954 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm16016-201ENSMUST00000120831 550 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm23954-201ENSMUST00000157213 353 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm26410-201ENSMUST00000157670 261 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm6541-201ENSMUST00000165542 561 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Scarletltr-201ENSMUST00000176950 305 ntTSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm21542-201ENSMUST00000182307 993 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm412-201ENSMUST00000193360 948 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm44837-201ENSMUST00000206863 717 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm10095-201ENSMUST00000222765 483 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Chmp6P0C0A3 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm25415-201ENSMUST00000104220 132 ntBASIC6.56□□□□□ -1.36
Chmp6P0C0A3 Gm8317-201ENSMUST00000121261 471 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms