Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm36799-201ENSMUST00000214113 1737 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm37121-201ENSMUST00000192219 2556 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Dgkh-206ENSMUST00000228362 3308 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 AC170188.1-201ENSMUST00000223710 1963 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 AC154828.1-201ENSMUST00000220696 2810 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 CU024890.1-201ENSMUST00000221361 2019 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Tktl1-201ENSMUST00000010127 2473 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Vezt-203ENSMUST00000118205 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm24071-201ENSMUST00000104520 132 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm6923-201ENSMUST00000118343 406 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm11969-201ENSMUST00000118848 356 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm12267-201ENSMUST00000121609 761 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm5924-201ENSMUST00000132554 871 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm26349-201ENSMUST00000157530 130 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm22336-201ENSMUST00000157719 107 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm23117-201ENSMUST00000158482 108 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Ear-ps9-201ENSMUST00000161963 460 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm27640-201ENSMUST00000184580 147 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Mir7029-201ENSMUST00000184777 61 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm6799-201ENSMUST00000186919 573 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm28080-201ENSMUST00000188552 722 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm37841-201ENSMUST00000195367 376 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm42621-201ENSMUST00000198114 275 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm18891-201ENSMUST00000216734 1087 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Hoxd3P09027 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC6.15□□□□□ -1.42
Hoxd3P09027 AC140208.1-201ENSMUST00000226609 285 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm25401-201ENSMUST00000082975 106 ntBASIC6.15□□□□□ -1.42
Hoxd3P09027 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Hoxd3P09027 Gm35172-201ENSMUST00000196037 2649 ntBASIC6.15□□□□□ -1.43
Hoxd3P09027 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.15□□□□□ -1.43
Hoxd3P09027 Gm43921-201ENSMUST00000204296 1792 ntBASIC6.15□□□□□ -1.43
Hoxd3P09027 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Hoxd3P09027 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
Hoxd3P09027 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Hoxd3P09027 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Hoxd3P09027 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.15□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 118.8 ms