Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44979-201ENSMUST00000206218 287 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm45008-201ENSMUST00000206420 493 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm19340-201ENSMUST00000221995 345 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm2754-201ENSMUST00000223383 589 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 AC161252.2-201ENSMUST00000224978 374 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 AC164618.1-201ENSMUST00000225769 592 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 AC154527.1-201ENSMUST00000225809 242 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 AC129537.1-201ENSMUST00000226596 1228 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 AC133958.1-201ENSMUST00000227085 961 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 AC122459.3-201ENSMUST00000228508 1042 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm5582-201ENSMUST00000075251 522 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm38137-201ENSMUST00000193735 1401 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Hmgb3O54879 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm37773-201ENSMUST00000194141 2120 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm29438-201ENSMUST00000191298 2613 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm24284-201ENSMUST00000104240 142 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm13183-201ENSMUST00000118615 789 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm15586-201ENSMUST00000121218 528 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm12540-201ENSMUST00000121938 319 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm23426-201ENSMUST00000122483 318 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm22533-201ENSMUST00000158821 274 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm23343-201ENSMUST00000158964 143 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm22548-201ENSMUST00000174899 78 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm23162-201ENSMUST00000175081 121 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm43743-202ENSMUST00000198353 491 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm8190-201ENSMUST00000199603 586 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm42804-201ENSMUST00000199701 178 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm7769-201ENSMUST00000212900 933 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 AC159886.1-201ENSMUST00000217099 1091 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 AC118230.1-201ENSMUST00000220196 656 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC4.84□□□□□ -1.63
Hmgb3O54879 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm19011-201ENSMUST00000221777 808 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 AC163743.1-201ENSMUST00000224309 270 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Hmgb3O54879 n-R5s65-201ENSMUST00000082614 117 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm22300-201ENSMUST00000082661 126 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm22581-201ENSMUST00000083735 136 ntBASIC4.84□□□□□ -1.63
Hmgb3O54879 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Hmgb3O54879 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Hmgb3O54879 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms