Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm29640-201ENSMUST00000187972 278 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Olfr1055-202ENSMUST00000188023 939 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm28466-201ENSMUST00000190678 659 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm19086-201ENSMUST00000190772 665 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm37213-201ENSMUST00000193077 586 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm2398-201ENSMUST00000218347 883 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 AC123534.1-201ENSMUST00000224060 656 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 AC122937.2-201ENSMUST00000228258 1051 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 AC164295.2-201ENSMUST00000228539 757 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
H2afb3S4R1G7 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.49
H2afb3S4R1G7 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
H2afb3S4R1G7 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
H2afb3S4R1G7 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
H2afb3S4R1G7 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
H2afb3S4R1G7 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
H2afb3S4R1G7 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
H2afb3S4R1G7 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm2178-201ENSMUST00000104927 357 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm13877-201ENSMUST00000120614 417 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm8648-201ENSMUST00000122457 221 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm26254-201ENSMUST00000122491 118 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm26167-201ENSMUST00000158423 253 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Lrrc51-210ENSMUST00000163903 939 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Mir3473c-201ENSMUST00000175262 81 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm27295-201ENSMUST00000184264 153 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Mir6769b-201ENSMUST00000184793 60 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm27160-201ENSMUST00000184837 199 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Igkv4-77-201ENSMUST00000199410 352 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm44225-201ENSMUST00000203582 186 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm44896-201ENSMUST00000206190 772 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm32983-201ENSMUST00000208500 505 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm19092-201ENSMUST00000209036 969 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm6575-201ENSMUST00000222946 697 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 AC151730.1-201ENSMUST00000226106 448 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Gm9985-201ENSMUST00000044101 510 ntBASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
H2afb3S4R1G7 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms