Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm24989-201ENSMUST00000104461 88 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm14375-201ENSMUST00000119490 855 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm13740-201ENSMUST00000120590 310 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm22276-201ENSMUST00000122469 129 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm25487-201ENSMUST00000158725 125 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm22548-201ENSMUST00000174899 78 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm18006-201ENSMUST00000177411 662 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm27348-201ENSMUST00000184511 170 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm28918-201ENSMUST00000188822 699 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm45448-201ENSMUST00000211739 209 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm18103-201ENSMUST00000216621 779 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 AC107757.1-201ENSMUST00000226780 357 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm22351-201ENSMUST00000083925 107 ntBASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Trim3Q9R1R2 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm37951-201ENSMUST00000192963 3032 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm44229-201ENSMUST00000203211 2487 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 n-R5s178-201ENSMUST00000104249 114 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm15016-201ENSMUST00000117300 720 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm12140-201ENSMUST00000121214 544 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm5125-201ENSMUST00000148614 624 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Mir5107-201ENSMUST00000175586 88 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm37770-201ENSMUST00000192855 772 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm37809-201ENSMUST00000195050 931 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm43354-201ENSMUST00000196862 346 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm6850-201ENSMUST00000210031 530 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Gm5055-201ENSMUST00000215697 581 ntBASIC5.79□□□□□ -1.48
Trim3Q9R1R2 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms