Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
Cdc40Q9DC48 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm22371-201ENSMUST00000104588 130 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm13114-201ENSMUST00000117605 106 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm12115-201ENSMUST00000119969 447 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm27512-201ENSMUST00000175328 126 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm28934-201ENSMUST00000186491 346 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm8241-201ENSMUST00000189286 816 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm44312-201ENSMUST00000203536 469 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Cdc40Q9DC48 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdc40Q9DC48 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdc40Q9DC48 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cdc40Q9DC48 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.71□□□□□ -1.49
Cdc40Q9DC48 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Cdc40Q9DC48 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Cdc40Q9DC48 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Cdc40Q9DC48 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Cdc40Q9DC48 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm13578-201ENSMUST00000120849 590 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm22518-201ENSMUST00000158267 68 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm17366-201ENSMUST00000167629 187 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm22655-201ENSMUST00000174949 96 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Mir5107-201ENSMUST00000175586 88 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm28527-201ENSMUST00000185210 297 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm8009-201ENSMUST00000191672 436 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm7343-201ENSMUST00000194510 1061 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm5027-201ENSMUST00000206700 375 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Mir412-201ENSMUST00000083636 80 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms