Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm22371-201ENSMUST00000104588 130 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm13578-201ENSMUST00000120849 590 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm24735-201ENSMUST00000158859 118 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm5430-201ENSMUST00000182525 915 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm412-201ENSMUST00000193360 948 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm44312-201ENSMUST00000203536 469 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm19033-201ENSMUST00000208516 964 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 AL603745.1-201ENSMUST00000215473 532 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.3□□□□□ -1.4
Chmp2aQ9DB34 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm9519-201ENSMUST00000206108 1337 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm15781-201ENSMUST00000120216 323 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm11925-201ENSMUST00000121375 535 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm12618-201ENSMUST00000121754 483 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm23896-201ENSMUST00000158109 130 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm24081-201ENSMUST00000175177 125 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm37735-201ENSMUST00000193995 1406 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm8979-201ENSMUST00000183386 7296 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
Chmp2aQ9DB34 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Chmp2aQ9DB34 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms