Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.12□□□□□ -1.43
Msh4Q99MT2 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.12□□□□□ -1.43
Msh4Q99MT2 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.12□□□□□ -1.43
Msh4Q99MT2 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Msh4Q99MT2 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm24069-201ENSMUST00000104512 127 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm14756-201ENSMUST00000116395 240 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm12874-201ENSMUST00000117190 913 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm14836-201ENSMUST00000118567 471 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm23884-201ENSMUST00000122687 294 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm16571-201ENSMUST00000159112 291 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm23632-201ENSMUST00000175289 125 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm9529-201ENSMUST00000177598 579 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm43850-201ENSMUST00000202021 578 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 AC153899.1-201ENSMUST00000214092 1117 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 AC153557.1-201ENSMUST00000217697 403 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm19340-201ENSMUST00000221995 345 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.11□□□□□ -1.43
Msh4Q99MT2 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msh4Q99MT2 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msh4Q99MT2 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Msh4Q99MT2 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
Msh4Q99MT2 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm12937-201ENSMUST00000118333 448 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm15765-201ENSMUST00000118407 910 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm13455-201ENSMUST00000118767 517 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm14018-201ENSMUST00000119042 455 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm11866-201ENSMUST00000120209 335 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm15225-201ENSMUST00000120449 1017 ntBASIC6.1□□□□□ -1.43
Msh4Q99MT2 Gm12372-201ENSMUST00000121654 768 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms