Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.23□□□□□ -1.41
Cstf1Q99LC2 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Cstf1Q99LC2 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.23□□□□□ -1.41
Cstf1Q99LC2 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cstf1Q99LC2 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.23□□□□□ -1.41
Cstf1Q99LC2 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cstf1Q99LC2 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Cstf1Q99LC2 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cstf1Q99LC2 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Cstf1Q99LC2 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Cstf1Q99LC2 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 AL670757.1-201ENSMUST00000223668 1959 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm15901-201ENSMUST00000117663 941 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm11893-201ENSMUST00000117829 491 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm26489-201ENSMUST00000157880 264 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm23259-201ENSMUST00000158318 303 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm28443-201ENSMUST00000189081 698 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm19182-201ENSMUST00000207139 577 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm18996-201ENSMUST00000214851 755 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 AC153870.1-201ENSMUST00000219599 560 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm7676-201ENSMUST00000084055 319 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 AC156163.1-201ENSMUST00000215598 3369 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cstf1Q99LC2 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
Cstf1Q99LC2 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cstf1Q99LC2 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Cstf1Q99LC2 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.21□□□□□ -1.41
Cstf1Q99LC2 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cstf1Q99LC2 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Cstf1Q99LC2 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Cstf1Q99LC2 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cstf1Q99LC2 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm8501-201ENSMUST00000117684 432 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm15233-201ENSMUST00000118747 400 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm8855-201ENSMUST00000118888 878 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Mir3062-201ENSMUST00000174986 105 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm2058-201ENSMUST00000178791 560 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm27970-201ENSMUST00000184854 407 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 AC122332.1-201ENSMUST00000214384 285 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Gm9202-201ENSMUST00000223036 437 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cstf1Q99LC2 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms