Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm25120-201ENSMUST00000180148 79 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm44003-201ENSMUST00000203024 490 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm9373-201ENSMUST00000208724 599 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 P2ry14-203ENSMUST00000196081 1615 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.23□□□□□ -1.41
Clrn1Q8K445 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC6.23□□□□□ -1.41
Clrn1Q8K445 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm14445-201ENSMUST00000117051 1484 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Fbxw23-202ENSMUST00000198480 1388 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 AC123629.1-201ENSMUST00000225669 1364 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm16383-201ENSMUST00000118122 232 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm14870-201ENSMUST00000118414 156 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm5166-201ENSMUST00000121332 573 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm26915-201ENSMUST00000183080 748 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm28620-201ENSMUST00000190463 439 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm18382-201ENSMUST00000194394 582 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm4860-201ENSMUST00000200368 454 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm21054-201ENSMUST00000203981 380 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm8209-201ENSMUST00000206386 553 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 AC174082.2-201ENSMUST00000222094 543 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.22□□□□□ -1.41
Clrn1Q8K445 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Clrn1Q8K445 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clrn1Q8K445 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms