Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm23952-201ENSMUST00000179380 109 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm27160-201ENSMUST00000184837 199 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm27998-201ENSMUST00000184902 361 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm28080-201ENSMUST00000188552 722 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm29111-201ENSMUST00000188823 696 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm21524-201ENSMUST00000190499 696 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm21715-201ENSMUST00000191056 694 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm28584-201ENSMUST00000191489 696 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm37189-201ENSMUST00000192131 298 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm38138-201ENSMUST00000193274 696 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm37991-201ENSMUST00000194297 696 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 AC154527.3-201ENSMUST00000225519 989 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm22351-201ENSMUST00000083925 107 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 CT009757.5-201ENSMUST00000221858 3425 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Brf1Q8CFK2 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm11516-201ENSMUST00000118450 1582 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 AC114585.1-201ENSMUST00000228080 3680 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 AC154612.1-202ENSMUST00000224806 1725 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm13771-201ENSMUST00000117988 238 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm15741-201ENSMUST00000119401 754 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm16074-201ENSMUST00000119524 444 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm4764-201ENSMUST00000130207 1233 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm8367-201ENSMUST00000186145 887 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm29663-201ENSMUST00000186962 853 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm29551-201ENSMUST00000190913 698 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm19002-201ENSMUST00000192649 1012 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Ighv1-45-201ENSMUST00000193677 352 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm37838-201ENSMUST00000194464 312 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm32158-201ENSMUST00000200135 404 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm4548-201ENSMUST00000208487 509 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm15500-201ENSMUST00000071523 894 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Gm43981-201ENSMUST00000203285 1467 ntBASIC7.42□□□□□ -1.22
Brf1Q8CFK2 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm12643-201ENSMUST00000116078 374 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm15696-201ENSMUST00000121730 445 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm12094-201ENSMUST00000121781 472 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm12152-201ENSMUST00000122465 684 ntBASIC7.41□□□□□ -1.22
Brf1Q8CFK2 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms