Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Gm8412-201ENSMUST00000077493 440 ntBASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Gm24029-201ENSMUST00000083928 143 ntBASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Ccdc28aQ8CEI3 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm13770-201ENSMUST00000117149 305 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm18700-201ENSMUST00000185791 553 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 AC122844.1-201ENSMUST00000195971 107 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm43361-201ENSMUST00000196562 4690 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm43779-201ENSMUST00000196691 829 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm19007-201ENSMUST00000217746 874 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm6104-201ENSMUST00000078030 603 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Ccdc28aQ8CEI3 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm26340-201ENSMUST00000102365 99 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm24869-201ENSMUST00000104072 128 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm6744-201ENSMUST00000119303 543 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm11370-201ENSMUST00000120583 260 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm12322-201ENSMUST00000121605 389 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm23888-201ENSMUST00000122690 253 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm23279-201ENSMUST00000157912 97 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm24363-201ENSMUST00000158440 311 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm9556-201ENSMUST00000182938 940 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Mir6987-201ENSMUST00000184789 73 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm37196-201ENSMUST00000194762 906 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm3544-201ENSMUST00000196129 305 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 BC049739-201ENSMUST00000202626 660 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm18689-201ENSMUST00000203969 902 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm44147-201ENSMUST00000204658 94 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Gm19116-201ENSMUST00000218592 642 ntBASIC6.23□□□□□ -1.41
Ccdc28aQ8CEI3 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms