Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm27193-201ENSMUST00000184217 586 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm19739-201ENSMUST00000195941 153 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm44382-201ENSMUST00000198683 122 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm6702-201ENSMUST00000208496 471 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm45724-201ENSMUST00000213031 420 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm18955-201ENSMUST00000223173 649 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Trub1Q8C0D0 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm24434-201ENSMUST00000104081 132 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm25065-201ENSMUST00000177914 132 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm25891-201ENSMUST00000180050 132 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm28586-201ENSMUST00000189857 456 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm35013-201ENSMUST00000197218 832 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm44053-201ENSMUST00000203364 929 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm19154-201ENSMUST00000223330 940 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm10108-201ENSMUST00000078246 319 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm22351-201ENSMUST00000083925 107 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.17□□□□□ -1.42
Trub1Q8C0D0 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm12890-201ENSMUST00000120885 373 ntBASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Mir6992-201ENSMUST00000183342 109 ntBASIC6.16□□□□□ -1.42
Trub1Q8C0D0 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm43467-201ENSMUST00000197441 437 ntBASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Trub1Q8C0D0 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 165.9 ms