Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 AC155298.1-201ENSMUST00000225350 3250 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Snora44-201ENSMUST00000082670 129 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm45413-201ENSMUST00000210389 3538 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm37943-201ENSMUST00000194053 3944 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.51□□□□□ -1.05
Usp47Q8BY87 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Usp47Q8BY87 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm25826-201ENSMUST00000157090 137 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm23030-201ENSMUST00000158004 273 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm15970-201ENSMUST00000160623 834 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm37187-201ENSMUST00000193425 341 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm7181-201ENSMUST00000202197 434 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm8523-201ENSMUST00000211386 552 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm23502-201ENSMUST00000083902 145 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Gm38377-201ENSMUST00000193253 3772 ntBASIC8.5□□□□□ -1.05
Usp47Q8BY87 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Vmn1r188-202ENSMUST00000226680 8374 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Usp47Q8BY87 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm5073-201ENSMUST00000118222 820 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm12494-201ENSMUST00000121684 521 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm24065-201ENSMUST00000157487 264 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm24719-201ENSMUST00000157520 110 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm23408-201ENSMUST00000158523 265 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm29745-201ENSMUST00000198005 687 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm42961-201ENSMUST00000202023 181 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm17994-201ENSMUST00000209260 533 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 CT009600.1-201ENSMUST00000228771 337 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 n-R5s69-201ENSMUST00000083872 119 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Gm36936-201ENSMUST00000194508 2749 ntBASIC8.49□□□□□ -1.05
Usp47Q8BY87 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Usp47Q8BY87 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm14115-201ENSMUST00000119242 482 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm8761-201ENSMUST00000121507 955 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm22867-201ENSMUST00000157499 109 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm23539-201ENSMUST00000157537 224 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm27024-201ENSMUST00000182561 755 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Vis1-201ENSMUST00000183957 201 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm44432-201ENSMUST00000203342 938 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Gm44053-201ENSMUST00000203364 929 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 CU062626.1-201ENSMUST00000225248 505 ntBASIC8.48□□□□□ -1.05
Usp47Q8BY87 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Usp47Q8BY87 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms