Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Usp40Q8BWR4 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 AC153959.1-201ENSMUST00000213617 1694 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm25414-201ENSMUST00000101814 107 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm5387-201ENSMUST00000119776 857 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Snora47-201ENSMUST00000157483 138 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm24065-201ENSMUST00000157487 264 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm24081-201ENSMUST00000175177 125 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm27854-201ENSMUST00000175578 244 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm7745-201ENSMUST00000182235 973 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Mir6362-201ENSMUST00000184329 107 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm38122-201ENSMUST00000192679 885 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm45636-201ENSMUST00000210497 1064 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 AC126673.2-201ENSMUST00000221052 686 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 AC158142.3-201ENSMUST00000226230 675 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 AC163664.2-201ENSMUST00000228894 459 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 n-R5s180-201ENSMUST00000082770 106 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm24041-201ENSMUST00000083115 156 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Usp40Q8BWR4 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm14695-201ENSMUST00000121721 282 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm25363-201ENSMUST00000158850 245 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm23164-201ENSMUST00000175084 111 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm20689-201ENSMUST00000176033 279 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm18356-201ENSMUST00000185677 623 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm29640-201ENSMUST00000187972 278 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm5066-201ENSMUST00000188479 822 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm37203-201ENSMUST00000191618 385 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Ighv1-27-201ENSMUST00000194473 340 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm43489-201ENSMUST00000196810 993 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm21461-201ENSMUST00000200382 863 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm43093-201ENSMUST00000202439 1213 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Gm18863-201ENSMUST00000217004 1299 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 AC163651.2-202ENSMUST00000222628 1192 ntTSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 AC162934.3-201ENSMUST00000223015 841 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 AC129537.1-201ENSMUST00000226596 1228 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 AC124709.3-201ENSMUST00000227294 171 ntBASIC8.53□□□□□ -1.04
Usp40Q8BWR4 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Usp40Q8BWR4 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms