Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm44718-201ENSMUST00000206886 359 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 AC124399.1-201ENSMUST00000218334 590 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 AC102291.1-201ENSMUST00000227164 529 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim41Q5NCC3 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm37109-201ENSMUST00000195475 2254 ntBASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm19028-201ENSMUST00000189614 1873 ntBASIC12.64□□□□□ -0.39
Trim41Q5NCC3 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm7309-201ENSMUST00000121670 581 ntBASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm27014-201ENSMUST00000182658 937 ntBASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm9357-201ENSMUST00000207138 805 ntBASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm46424-201ENSMUST00000221567 168 ntBASIC12.64□□□□□ -0.39
Trim41Q5NCC3 AC124489.1-201ENSMUST00000225852 526 ntBASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim41Q5NCC3 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm37520-201ENSMUST00000194883 2672 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm12386-201ENSMUST00000117380 688 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm15203-201ENSMUST00000117668 455 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm11512-201ENSMUST00000119669 663 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm2855-201ENSMUST00000166765 456 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm8032-201ENSMUST00000171009 574 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm4617-201ENSMUST00000178993 331 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm27998-201ENSMUST00000184902 361 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm7496-201ENSMUST00000192573 1034 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm2602-201ENSMUST00000202112 571 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm14367-201ENSMUST00000119214 1497 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm44104-201ENSMUST00000204736 3777 ntBASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim41Q5NCC3 Gm13575-201ENSMUST00000142353 1520 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm13310-201ENSMUST00000120962 1381 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm23133-201ENSMUST00000104255 135 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm25379-201ENSMUST00000104338 114 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm12717-201ENSMUST00000118427 983 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm12578-201ENSMUST00000121244 417 ntBASIC12.62□□□□□ -0.39
Trim41Q5NCC3 Gm22480-201ENSMUST00000122568 128 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms