Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm29551-201ENSMUST00000190913 698 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm44374-201ENSMUST00000199821 140 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm9535-201ENSMUST00000218499 768 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Mir412-201ENSMUST00000083636 80 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Naip3-201ENSMUST00000118082 4208 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Trim43aQ3TL54 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm23979-201ENSMUST00000104071 128 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm11609-201ENSMUST00000121926 793 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm18808-201ENSMUST00000173316 462 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm22548-201ENSMUST00000174899 78 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 AC160114.2-201ENSMUST00000223021 300 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.44□□□□□ -1.38
Trim43aQ3TL54 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Gm8312-201ENSMUST00000119380 618 ntBASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.43□□□□□ -1.38
Trim43aQ3TL54 Gm7494-201ENSMUST00000121248 441 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms