Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm10743-201ENSMUST00000219611 2358 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC4.02□□□□□ -1.77
PrkdcP97313 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PrkdcP97313 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm24429-201ENSMUST00000104076 132 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm11975-201ENSMUST00000118772 481 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm12267-201ENSMUST00000121609 761 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC4.02□□□□□ -1.77
PrkdcP97313 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC4.02□□□□□ -1.77
PrkdcP97313 AC165347.1-201ENSMUST00000224089 1025 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.02□□□□□ -1.77
PrkdcP97313 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm14935-201ENSMUST00000121528 1708 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Hivep2-201ENSMUST00000015645 9763 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm23879-201ENSMUST00000116874 126 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm16345-201ENSMUST00000146065 158 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm22916-201ENSMUST00000157616 119 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm9687-201ENSMUST00000189312 602 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm19002-201ENSMUST00000192649 1012 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm42461-201ENSMUST00000198627 1150 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm8667-201ENSMUST00000211112 449 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm29785-201ENSMUST00000217033 383 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm45250-201ENSMUST00000209414 3592 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PrkdcP97313 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PrkdcP97313 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
PrkdcP97313 n-R5s89-201ENSMUST00000083532 104 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Sec24c-202ENSMUST00000223751 4196 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm37347-201ENSMUST00000193969 3071 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
PrkdcP97313 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm37648-201ENSMUST00000192072 2563 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 AC110043.1-201ENSMUST00000220278 1627 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm29488-201ENSMUST00000191427 2402 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Gm37308-201ENSMUST00000194684 100 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.01□□□□□ -1.77
PrkdcP97313 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PrkdcP97313 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PrkdcP97313 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PrkdcP97313 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Gm37127-201ENSMUST00000192924 3036 ntBASIC4□□□□□ -1.77
PrkdcP97313 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PrkdcP97313 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Plekhg1-202ENSMUST00000120274 7369 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PrkdcP97313 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4□□□□□ -1.77
PrkdcP97313 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PrkdcP97313 Gm42679-201ENSMUST00000197086 2906 ntBASIC4□□□□□ -1.77
PrkdcP97313 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
PrkdcP97313 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms