Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm10177-201ENSMUST00000160052 444 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.62□□□□□ -1.51
Cdh11P55288 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm17121-201ENSMUST00000170414 847 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm22690-201ENSMUST00000175054 110 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm17222-201ENSMUST00000180135 847 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm36994-201ENSMUST00000192941 492 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC5.62□□□□□ -1.51
Cdh11P55288 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm45072-201ENSMUST00000208673 929 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm44683-201ENSMUST00000209088 484 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 Gm45610-201ENSMUST00000209227 784 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm7439-201ENSMUST00000214053 835 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm46364-201ENSMUST00000218548 319 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC5.62□□□□□ -1.51
Cdh11P55288 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Cdh11P55288 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Cdh11P55288 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdh11P55288 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Cdh11P55288 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Cdh11P55288 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Gm11799-201ENSMUST00000116110 460 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm8250-201ENSMUST00000117398 774 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm15765-201ENSMUST00000118407 910 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm16016-201ENSMUST00000120831 550 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Gm25117-201ENSMUST00000157194 144 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdh11P55288 Gm27348-201ENSMUST00000184511 170 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm37380-201ENSMUST00000193752 397 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Cdh11P55288 Gm37477-201ENSMUST00000195215 884 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdh11P55288 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC5.61□□□□□ -1.51
Cdh11P55288 Gm44265-201ENSMUST00000203631 465 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdh11P55288 AC110816.1-201ENSMUST00000218559 980 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm9472-201ENSMUST00000221625 526 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Gm19189-201ENSMUST00000221689 754 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Cdh11P55288 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Cdh11P55288 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
Cdh11P55288 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Cdh11P55288 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.61□□□□□ -1.51
Cdh11P55288 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Cdh11P55288 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdh11P55288 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdh11P55288 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.6□□□□□ -1.51
Cdh11P55288 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdh11P55288 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdh11P55288 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.6□□□□□ -1.51
Cdh11P55288 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdh11P55288 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdh11P55288 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdh11P55288 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Cdh11P55288 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Cdh11P55288 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Cdh11P55288 Gm23311-201ENSMUST00000104152 134 ntBASIC5.6□□□□□ -1.51
Cdh11P55288 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Cdh11P55288 Gm11617-201ENSMUST00000119609 639 ntBASIC5.6□□□□□ -1.51
Cdh11P55288 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.6□□□□□ -1.51
Cdh11P55288 Gm15181-201ENSMUST00000120142 177 ntBASIC5.6□□□□□ -1.51
Cdh11P55288 Gm14515-201ENSMUST00000121327 216 ntBASIC5.6□□□□□ -1.51
Cdh11P55288 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.6□□□□□ -1.51
Cdh11P55288 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms