Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC9.27□□□□□ -0.93
Cux1P53564 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Cux1P53564 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 n-R5s161-201ENSMUST00000083728 114 ntBASIC9.27□□□□□ -0.93
Cux1P53564 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
Cux1P53564 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Cux1P53564 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cux1P53564 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
Cux1P53564 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Cux1P53564 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Cux1P53564 Gm20768-201ENSMUST00000199527 2338 ntBASIC9.27□□□□□ -0.93
Cux1P53564 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Cux1P53564 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC9.26□□□□□ -0.93
Cux1P53564 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cux1P53564 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cux1P53564 Gm24236-201ENSMUST00000157794 134 ntBASIC9.26□□□□□ -0.93
Cux1P53564 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC9.26□□□□□ -0.93
Cux1P53564 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC9.26□□□□□ -0.93
Cux1P53564 Gm43724-201ENSMUST00000197516 226 ntBASIC9.26□□□□□ -0.93
Cux1P53564 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Cux1P53564 Gm43554-201ENSMUST00000199987 186 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Gm7181-201ENSMUST00000202197 434 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Gm7832-201ENSMUST00000202613 880 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Cux1P53564 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC9.26□□□□□ -0.93
Cux1P53564 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC9.26□□□□□ -0.93
Cux1P53564 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC9.26□□□□□ -0.93
Cux1P53564 AV026068-231ENSMUST00000225862 482 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Cux1P53564 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Cux1P53564 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC9.26□□□□□ -0.93
Cux1P53564 AC022682.2-202ENSMUST00000224394 3943 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cux1P53564 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cux1P53564 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC9.26□□□□□ -0.93
Cux1P53564 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Cux1P53564 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cux1P53564 Gm5381-201ENSMUST00000117975 1250 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Gm14267-201ENSMUST00000119751 496 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC9.26□□□□□ -0.93
Cux1P53564 Mir6903-201ENSMUST00000183597 88 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC9.26□□□□□ -0.93
Cux1P53564 Ighv1-45-201ENSMUST00000193677 352 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC9.26□□□□□ -0.93
Cux1P53564 Mir218-2-201ENSMUST00000083649 110 ntBASIC9.26□□□□□ -0.93
Cux1P53564 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Cux1P53564 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Cux1P53564 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cux1P53564 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cux1P53564 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Gm42885-201ENSMUST00000200763 4214 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Gm14512-201ENSMUST00000117924 230 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC9.25□□□□□ -0.93
Cux1P53564 Gm23546-201ENSMUST00000158211 137 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Mir1963-201ENSMUST00000158594 59 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Gm23774-201ENSMUST00000158990 131 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Gm20480-201ENSMUST00000173953 250 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC9.25□□□□□ -0.93
Cux1P53564 Gm8604-201ENSMUST00000183150 965 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Gm38015-201ENSMUST00000193048 188 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Gm37341-201ENSMUST00000194680 371 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC9.25□□□□□ -0.93
Cux1P53564 Gm4587-201ENSMUST00000209135 637 ntBASIC9.25□□□□□ -0.93
Cux1P53564 Gm18850-201ENSMUST00000211578 388 ntBASIC9.25□□□□□ -0.93
Cux1P53564 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC9.25□□□□□ -0.93
Cux1P53564 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Cux1P53564 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Cux1P53564 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
Cux1P53564 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC9.24□□□□□ -0.93
Cux1P53564 Gm45477-201ENSMUST00000200213 5498 ntBASIC9.24□□□□□ -0.93
Cux1P53564 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Cux1P53564 AC129085.2-201ENSMUST00000223763 2800 ntBASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms