Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm26289-201ENSMUST00000104169 131 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm14173-201ENSMUST00000117690 278 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm22818-201ENSMUST00000157446 104 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm22600-201ENSMUST00000157598 269 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm24435-201ENSMUST00000157886 110 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm3008-201ENSMUST00000160566 571 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm17137-202ENSMUST00000165729 957 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm20620-201ENSMUST00000177528 168 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm23945-201ENSMUST00000179609 92 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.75□□□□□ -1.33
Shmt1P50431 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm37770-201ENSMUST00000192855 772 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm18529-201ENSMUST00000193025 1257 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm42926-201ENSMUST00000200496 697 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm45196-201ENSMUST00000206751 825 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm45514-201ENSMUST00000211531 689 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 AC153646.1-201ENSMUST00000223229 1279 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 AC159242.1-201ENSMUST00000225832 194 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 AC164295.2-201ENSMUST00000228539 757 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm25799-201ENSMUST00000082643 107 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Shmt1P50431 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.75□□□□□ -1.33
Shmt1P50431 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Shmt1P50431 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.75□□□□□ -1.33
Shmt1P50431 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Shmt1P50431 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Shmt1P50431 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Shmt1P50431 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Snora35-201ENSMUST00000104579 128 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm15901-201ENSMUST00000117663 941 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm14943-201ENSMUST00000118056 546 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm12383-201ENSMUST00000120628 760 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm25219-201ENSMUST00000157545 330 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm25487-201ENSMUST00000158725 125 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Shmt1P50431 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm22254-201ENSMUST00000179186 110 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm29234-201ENSMUST00000187452 1262 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.74□□□□□ -1.33
Shmt1P50431 Gm42983-201ENSMUST00000199879 815 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm43233-201ENSMUST00000200491 616 ntBASIC6.74□□□□□ -1.33
Shmt1P50431 Gm44681-201ENSMUST00000208447 842 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 106.9 ms