Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
Brca1P48754 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
Brca1P48754 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm7927-201ENSMUST00000118818 880 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Gm14349-201ENSMUST00000137155 902 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC6.85□□□□□ -1.31
Brca1P48754 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Gm8039-201ENSMUST00000204758 712 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.85□□□□□ -1.31
Brca1P48754 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Brca1P48754 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC6.85□□□□□ -1.31
Brca1P48754 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Brca1P48754 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.85□□□□□ -1.31
Brca1P48754 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Brca1P48754 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Brca1P48754 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.84□□□□□ -1.31
Brca1P48754 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.84□□□□□ -1.31
Brca1P48754 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.84□□□□□ -1.31
Brca1P48754 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 Ear-ps5-201ENSMUST00000164700 463 ntBASIC6.84□□□□□ -1.31
Brca1P48754 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.84□□□□□ -1.31
Brca1P48754 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC6.84□□□□□ -1.31
Brca1P48754 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.84□□□□□ -1.31
Brca1P48754 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.84□□□□□ -1.31
Brca1P48754 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.84□□□□□ -1.31
Brca1P48754 Gm19174-201ENSMUST00000216944 956 ntBASIC6.84□□□□□ -1.31
Brca1P48754 Aktip-204ENSMUST00000120426 1687 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
Brca1P48754 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Brca1P48754 Gm9877-201ENSMUST00000064271 2627 ntBASIC6.84□□□□□ -1.31
Brca1P48754 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Brca1P48754 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Brca1P48754 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.84□□□□□ -1.32
Brca1P48754 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Brca1P48754 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.84□□□□□ -1.32
Brca1P48754 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brca1P48754 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Brca1P48754 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Brca1P48754 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Brca1P48754 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brca1P48754 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Brca1P48754 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brca1P48754 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brca1P48754 Gm22273-201ENSMUST00000104040 132 ntBASIC6.83□□□□□ -1.32
Brca1P48754 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Brca1P48754 Gm24295-201ENSMUST00000158298 131 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Gm17086-201ENSMUST00000171346 484 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.83□□□□□ -1.32
Brca1P48754 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Brca1P48754 Gm26731-201ENSMUST00000180683 543 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.83□□□□□ -1.32
Brca1P48754 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Gm37341-201ENSMUST00000194680 371 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Gm44494-201ENSMUST00000196760 129 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Gm43516-201ENSMUST00000196891 322 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.83□□□□□ -1.32
Brca1P48754 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.83□□□□□ -1.32
Brca1P48754 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC6.83□□□□□ -1.32
Brca1P48754 AC117240.2-201ENSMUST00000220921 263 ntBASIC6.83□□□□□ -1.32
Brca1P48754 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.83□□□□□ -1.32
Brca1P48754 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.83□□□□□ -1.32
Brca1P48754 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms