Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Traf1P39428 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Traf1P39428 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Traf1P39428 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Traf1P39428 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Traf1P39428 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Traf1P39428 Gm42819-201ENSMUST00000199630 5121 ntBASIC7.21□□□□□ -1.25
Traf1P39428 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Traf1P39428 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Gm23739-201ENSMUST00000102295 108 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.21□□□□□ -1.26
Traf1P39428 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Traf1P39428 n-R5s48-201ENSMUST00000122482 110 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC7.21□□□□□ -1.26
Traf1P39428 Gm24735-201ENSMUST00000158859 118 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm24733-201ENSMUST00000158863 253 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.21□□□□□ -1.26
Traf1P39428 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 Gm8009-201ENSMUST00000191672 436 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm6631-201ENSMUST00000193699 559 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm19033-201ENSMUST00000208516 964 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm8863-201ENSMUST00000216630 926 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC7.21□□□□□ -1.26
Traf1P39428 AC153943.1-201ENSMUST00000219312 256 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm18628-201ENSMUST00000220584 475 ntBASIC7.21□□□□□ -1.26
Traf1P39428 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 AC211878.1-201ENSMUST00000221668 474 ntBASIC7.21□□□□□ -1.26
Traf1P39428 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm8256-203ENSMUST00000228692 591 ntBASIC7.21□□□□□ -1.26
Traf1P39428 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 AC162936.1-201ENSMUST00000223676 2368 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Traf1P39428 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 AC130661.1-201ENSMUST00000218248 1680 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Gm37079-201ENSMUST00000194114 2135 ntBASIC7.21□□□□□ -1.26
Traf1P39428 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.21□□□□□ -1.26
Traf1P39428 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.21□□□□□ -1.26
Traf1P39428 Gm5832-201ENSMUST00000121704 1582 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
Traf1P39428 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
Traf1P39428 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC7.2□□□□□ -1.26
Traf1P39428 AC153144.1-201ENSMUST00000221759 3139 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Traf1P39428 Gm25917-201ENSMUST00000104267 130 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Gm12643-201ENSMUST00000116078 374 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm14712-201ENSMUST00000120195 772 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Gm20549-201ENSMUST00000174804 429 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm22655-201ENSMUST00000174949 96 ntBASIC7.2□□□□□ -1.26
Traf1P39428 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.2□□□□□ -1.26
Traf1P39428 Gm15257-201ENSMUST00000177680 883 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm15252-201ENSMUST00000177750 883 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm15256-201ENSMUST00000177793 883 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm15260-201ENSMUST00000179402 883 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Mir6361-201ENSMUST00000185079 101 ntBASIC7.2□□□□□ -1.26
Traf1P39428 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.2□□□□□ -1.26
Traf1P39428 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Gm6693-201ENSMUST00000189583 813 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm37491-201ENSMUST00000192552 1111 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm43392-201ENSMUST00000196560 434 ntBASIC7.2□□□□□ -1.26
Traf1P39428 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm43436-201ENSMUST00000199308 147 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm44312-201ENSMUST00000203536 469 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm10688-201ENSMUST00000214985 520 ntBASIC7.2□□□□□ -1.26
Traf1P39428 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.2□□□□□ -1.26
Traf1P39428 Gm10095-201ENSMUST00000222765 483 ntBASIC7.2□□□□□ -1.26
Traf1P39428 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Traf1P39428 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Mir412-201ENSMUST00000083636 80 ntBASIC7.2□□□□□ -1.26
Traf1P39428 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Traf1P39428 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms