Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Mmp13P33435 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Mmp13P33435 Gm37076-201ENSMUST00000192033 2294 ntBASIC6.22□□□□□ -1.41
Mmp13P33435 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
Mmp13P33435 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Mmp13P33435 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.21□□□□□ -1.41
Mmp13P33435 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Mmp13P33435 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.21□□□□□ -1.41
Mmp13P33435 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Mmp13P33435 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.21□□□□□ -1.42
Mmp13P33435 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Mmp13P33435 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm12931-201ENSMUST00000117046 324 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Gm14580-201ENSMUST00000119122 718 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Gm13818-201ENSMUST00000119441 511 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.21□□□□□ -1.42
Mmp13P33435 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm15275-201ENSMUST00000154752 347 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.21□□□□□ -1.42
Mmp13P33435 Mir1960-201ENSMUST00000157488 78 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Gm26162-201ENSMUST00000157793 132 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Gm18006-201ENSMUST00000177411 662 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Gm27193-201ENSMUST00000184217 586 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Mir6989-201ENSMUST00000184812 65 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm5306-201ENSMUST00000203325 757 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm18940-201ENSMUST00000222518 871 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 AC158142.3-201ENSMUST00000226230 675 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 AC107757.1-201ENSMUST00000226780 357 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Mir3068-201ENSMUST00000083004 136 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Gm22581-201ENSMUST00000083735 136 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Mmp13P33435 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm45424-201ENSMUST00000210575 3300 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm8872-201ENSMUST00000197475 1341 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Mmp13P33435 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.21□□□□□ -1.42
Mmp13P33435 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Mmp13P33435 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Mmp13P33435 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.2□□□□□ -1.42
Mmp13P33435 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Mmp13P33435 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm14791-201ENSMUST00000119061 1166 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm12262-201ENSMUST00000119915 305 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm25117-201ENSMUST00000157194 144 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.2□□□□□ -1.42
Mmp13P33435 Mir7046-201ENSMUST00000183435 66 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm27998-201ENSMUST00000184902 361 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm37135-201ENSMUST00000192652 534 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm37809-201ENSMUST00000195050 931 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm3544-201ENSMUST00000196129 305 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.2□□□□□ -1.42
Mmp13P33435 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm22300-201ENSMUST00000082661 126 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Gm22684-201ENSMUST00000082849 132 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Mmp13P33435 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Mmp13P33435 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.2□□□□□ -1.42
Mmp13P33435 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Mmp13P33435 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Mmp13P33435 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms