Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gm35629-201ENSMUST00000209684 2241 ntBASIC6.23□□□□□ -1.41
BdnfP21237 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
BdnfP21237 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 AC103672.3-201ENSMUST00000227649 3243 ntBASIC6.23□□□□□ -1.41
BdnfP21237 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
BdnfP21237 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
BdnfP21237 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BdnfP21237 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
BdnfP21237 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.23□□□□□ -1.41
BdnfP21237 Gm5844-201ENSMUST00000119417 2191 ntBASIC6.23□□□□□ -1.41
BdnfP21237 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
BdnfP21237 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
BdnfP21237 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.22□□□□□ -1.41
BdnfP21237 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Gm26143-201ENSMUST00000104480 108 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BdnfP21237 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
BdnfP21237 Gm13423-201ENSMUST00000117205 888 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.22□□□□□ -1.41
BdnfP21237 Gm22820-201ENSMUST00000157205 329 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm22588-201ENSMUST00000157510 140 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm22915-201ENSMUST00000157615 136 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC6.22□□□□□ -1.41
BdnfP21237 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Mir7005-201ENSMUST00000185089 69 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Gm37908-201ENSMUST00000195828 470 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm44342-201ENSMUST00000196874 129 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm5288-201ENSMUST00000198323 1119 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm44383-201ENSMUST00000198940 129 ntBASIC6.22□□□□□ -1.41
BdnfP21237 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm8748-201ENSMUST00000211125 587 ntBASIC6.22□□□□□ -1.41
BdnfP21237 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.22□□□□□ -1.41
BdnfP21237 AC124450.1-201ENSMUST00000225569 495 ntBASIC6.22□□□□□ -1.41
BdnfP21237 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.22□□□□□ -1.41
BdnfP21237 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Cma2-202ENSMUST00000228263 857 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BdnfP21237 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
BdnfP21237 Ube2nl-201ENSMUST00000085228 456 ntBASIC6.22□□□□□ -1.41
BdnfP21237 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
BdnfP21237 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
BdnfP21237 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
BdnfP21237 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
BdnfP21237 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
BdnfP21237 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.21□□□□□ -1.41
BdnfP21237 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
BdnfP21237 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
BdnfP21237 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
BdnfP21237 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
BdnfP21237 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.21□□□□□ -1.41
BdnfP21237 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
BdnfP21237 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
BdnfP21237 Gm37393-201ENSMUST00000195118 3870 ntBASIC6.21□□□□□ -1.41
BdnfP21237 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
BdnfP21237 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
BdnfP21237 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
BdnfP21237 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BdnfP21237 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
BdnfP21237 Gm12468-201ENSMUST00000116189 404 ntBASIC6.21□□□□□ -1.42
BdnfP21237 Gm22710-201ENSMUST00000116892 125 ntBASIC6.21□□□□□ -1.42
BdnfP21237 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC6.21□□□□□ -1.42
BdnfP21237 Mup-ps21-201ENSMUST00000119998 448 ntBASIC6.21□□□□□ -1.42
BdnfP21237 Gm12105-201ENSMUST00000120846 779 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms