Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.42□□□□□ -1.54
P20040 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
P20040 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.42□□□□□ -1.54
P20040 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
P20040 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
P20040 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
P20040 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
P20040 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
P20040 AC140393.3-201ENSMUST00000228396 1352 ntBASIC5.42□□□□□ -1.54
P20040 AC022775.1-201ENSMUST00000228163 2698 ntBASIC5.41□□□□□ -1.54
P20040 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
P20040 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.41□□□□□ -1.54
P20040 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
P20040 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.41□□□□□ -1.54
P20040 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.41□□□□□ -1.54
P20040 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm24069-201ENSMUST00000104512 127 ntBASIC5.41□□□□□ -1.54
P20040 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
P20040 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm22103-201ENSMUST00000116733 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm26475-201ENSMUST00000116769 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm23620-201ENSMUST00000116812 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm25042-201ENSMUST00000116856 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm25540-201ENSMUST00000116880 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm8312-201ENSMUST00000119380 618 ntBASIC5.41□□□□□ -1.54
P20040 Gm14998-201ENSMUST00000120502 495 ntBASIC5.41□□□□□ -1.54
P20040 Gm11341-201ENSMUST00000122316 447 ntBASIC5.41□□□□□ -1.54
P20040 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm5125-201ENSMUST00000148614 624 ntBASIC5.41□□□□□ -1.54
P20040 Gm23259-201ENSMUST00000158318 303 ntBASIC5.41□□□□□ -1.54
P20040 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC5.41□□□□□ -1.54
P20040 Gm22548-201ENSMUST00000174899 78 ntBASIC5.41□□□□□ -1.54
P20040 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Gm23550-201ENSMUST00000179003 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm25123-201ENSMUST00000179154 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm25353-201ENSMUST00000179366 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm22992-201ENSMUST00000179496 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm25892-201ENSMUST00000179867 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm24092-201ENSMUST00000180257 121 ntBASIC5.41□□□□□ -1.54
P20040 Gm26557-201ENSMUST00000180756 493 ntBASIC5.41□□□□□ -1.54
P20040 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
P20040 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.41□□□□□ -1.54
P20040 Gm32158-201ENSMUST00000200135 404 ntBASIC5.41□□□□□ -1.54
P20040 Gm7492-201ENSMUST00000201745 725 ntBASIC5.41□□□□□ -1.54
P20040 Gm7832-201ENSMUST00000202613 880 ntBASIC5.41□□□□□ -1.54
P20040 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.41□□□□□ -1.54
P20040 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC5.41□□□□□ -1.54
P20040 Gm45628-201ENSMUST00000210849 274 ntBASIC5.41□□□□□ -1.54
P20040 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC5.41□□□□□ -1.54
P20040 Gm45448-201ENSMUST00000211739 209 ntBASIC5.41□□□□□ -1.54
P20040 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC5.41□□□□□ -1.54
P20040 Gm9321-201ENSMUST00000221179 778 ntBASIC5.41□□□□□ -1.54
P20040 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.41□□□□□ -1.54
P20040 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.41□□□□□ -1.54
P20040 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.41□□□□□ -1.54
P20040 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
P20040 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.41□□□□□ -1.54
P20040 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
P20040 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
P20040 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
P20040 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.41□□□□□ -1.54
P20040 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.41□□□□□ -1.54
P20040 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.41□□□□□ -1.54
P20040 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
P20040 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
P20040 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
P20040 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
P20040 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.4□□□□□ -1.54
P20040 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
P20040 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.4□□□□□ -1.54
P20040 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
P20040 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
P20040 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
P20040 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms