Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm6070-201ENSMUST00000207275 419 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 AC140930.1-201ENSMUST00000221889 389 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Gm43190-201ENSMUST00000187850 1779 ntBASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Chmp6P0C0A3 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm19210-201ENSMUST00000199562 1350 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm25795-201ENSMUST00000104421 132 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm26144-201ENSMUST00000104475 132 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm14294-201ENSMUST00000119749 751 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm15786-201ENSMUST00000121079 450 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Mir7046-201ENSMUST00000183435 66 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm43561-201ENSMUST00000199866 448 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm18839-201ENSMUST00000204292 670 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Chmp6P0C0A3 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm13835-201ENSMUST00000118459 685 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm25387-201ENSMUST00000157813 132 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm37463-201ENSMUST00000193819 796 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm7570-201ENSMUST00000215246 698 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 AC134917.2-201ENSMUST00000223354 124 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 AC154646.1-201ENSMUST00000225011 1092 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC6.59□□□□□ -1.35
Chmp6P0C0A3 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms