Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC120163.1-201ENSMUST00000228618 1680 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm43662-201ENSMUST00000198310 2271 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Zfp958-201ENSMUST00000073201 1401 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm44001-201ENSMUST00000203158 3773 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Rab36-206ENSMUST00000146440 2952 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Commd8-201ENSMUST00000013693 3895 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Soat1-207ENSMUST00000189661 8371 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 AC125409.2-201ENSMUST00000221888 2158 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm18186-201ENSMUST00000192239 1580 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm25167-201ENSMUST00000104188 120 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm25273-201ENSMUST00000104295 115 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm24683-201ENSMUST00000104840 88 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm10651-201ENSMUST00000118212 609 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Fau-ps2-201ENSMUST00000119333 371 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm14392-201ENSMUST00000120332 401 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm12755-201ENSMUST00000122297 282 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC6.16□□□□□ -1.42
Hoxd3P09027 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm9006-201ENSMUST00000165520 841 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm25525-201ENSMUST00000177701 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm26178-201ENSMUST00000177706 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm26465-201ENSMUST00000178517 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm24317-201ENSMUST00000178536 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm25021-201ENSMUST00000179184 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm22995-201ENSMUST00000179670 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm24424-201ENSMUST00000179714 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm24389-201ENSMUST00000179962 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm25672-201ENSMUST00000180111 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm21070-201ENSMUST00000182425 985 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm27034-201ENSMUST00000182552 940 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm27435-201ENSMUST00000183588 88 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm28141-201ENSMUST00000186676 342 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm18033-201ENSMUST00000186678 550 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm18342-201ENSMUST00000186987 694 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm29163-201ENSMUST00000188029 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm2427-201ENSMUST00000189121 881 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm37339-201ENSMUST00000194142 392 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm3933-201ENSMUST00000195391 439 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm44403-201ENSMUST00000198554 129 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm44590-201ENSMUST00000206161 391 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm44959-201ENSMUST00000209127 231 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm5654-201ENSMUST00000217787 475 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 AC147240.1-201ENSMUST00000218767 431 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm2436-201ENSMUST00000219562 774 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC6.16□□□□□ -1.42
Hoxd3P09027 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm18629-201ENSMUST00000222496 884 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 AC241621.1-201ENSMUST00000224499 430 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxd3P09027 AC121978.1-201ENSMUST00000228357 380 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm5316-201ENSMUST00000050391 270 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm23815-201ENSMUST00000083231 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm23520-201ENSMUST00000093736 107 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Hoxd3P09027 Atxn7l1-213ENSMUST00000154742 3548 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Adgrg1-202ENSMUST00000179619 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm43121-201ENSMUST00000199065 1305 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm42866-201ENSMUST00000195919 3304 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm42519-201ENSMUST00000199282 3656 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm17821-201ENSMUST00000223448 1693 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 Eps15l1-205ENSMUST00000212590 3376 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Hoxd3P09027 Gm44022-201ENSMUST00000203708 5429 ntBASIC6.16□□□□□ -1.42
Hoxd3P09027 AC154806.2-201ENSMUST00000227212 2385 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms